This page lists bioinformatics tools and software that are installed across several of the BioCommons infrastructure partner systems. Tool / software status on other infrastructure partner systems will be added over time.
Can’t find the software you need? Click here to see other options for finding software
BioContainers registry: discover and access containers for software tools
Galaxy toolshed: discover tools which can be requested for installation on Galaxy Australia
Dockstore tool search: discover containers for single tools
Click to find out how to request installation of software on ToolFinder listed infrastructures
Infrastructure | Process |
---|---|
Galaxy Australia | Complete a tool install request |
NCI | Contact NCI |
Pawsey | Visit the Helpdesk Portal or email: help@pawsey.org.au with your request |
QRIScloud / UQ-RCC | Complete a tool install request |
Please note:
NCI (if89)
below refers to the Australian BioCommons Tools and Workflows repository
,
located in project allocation if89 at the National Computational
Infrastructure (NCI).Note:
2024-06-12
.Tool identifier
column (hidden by default) contains
an identifier for the tool / workflow: typically the module name (used
for matching to HPC lists).Topic(s)
column categorises the tools by purpose,
using an EDAM
term where possible.[bio.tools links](https://bio.tools/)
.Containers available? (BioContainers)
column.How was the list generated?
Please see the GitHub repository for more details.