The interactive table below allows you to search for workflows registered by Australian BioCommons partners on WorkflowHub. If you would like to add your bioinformatics workflows to WorkflowHub, please see this getting started guide.
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| Workflow information | Credits | Deployment | ||||||
| Name | Topic(s) | Operation(s) | License | Last updated | Contributing Team(s) | DOI | User guide | Access |
| GPL-3.0 | 2023-01-16 |
Australian BioCommons |
View guide | |||||
| Taxonomic classification | GPL-3.0 | 2024-04-17 |
Galaxy Australia |
Import to Galaxy Australia | ||||
| Sequence alignment Variant calling Variant filtering | Apache-2.0 | 2023-01-16 |
Australian BioCommons Pawsey Supercomputing Research Centre |
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| Sequence alignment Variant calling Variant filtering | Apache-2.0 | 2023-01-16 |
Australian BioCommons Pawsey Supercomputing Research Centre |
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| GPL-3.0 | 2023-01-16 |
QCIF Bioinformatics |
DOI | View guide | ||||
| De-novo assembly Sequence assembly Transcriptome assembly | Apache-2.0 | 2023-01-16 |
Australian BioCommons Sydney Informatics Hub |
DOI | View guide | |||
| Variant calling Variant filtering | GPL-3.0 | 2023-01-16 |
Sydney Informatics Hub |
DOI | View guide | |||
| GPL-3.0 | 2023-01-16 |
Sydney Informatics Hub |
DOI | |||||
| De-novo assembly Sequence assembly Transcriptome assembly | GPL-3.0 | 2023-01-16 |
Australian BioCommons Sydney Informatics Hub |
DOI | ||||
| De-novo assembly Phasing | GPL-3.0 | 2023-01-16 |
Australian BioCommons Sydney Informatics Hub |
DOI | ||||
| Genome analysis Genome comparison Variant calling | GPL-3.0 | 2023-01-16 |
Sydney Informatics Hub |
DOI | View guide | |||
| Indel detection SNP detection Variant calling Variant filtering | GPL-3.0 | 2023-01-16 |
Australian BioCommons Sydney Informatics Hub |
DOI | View guide | |||
| Sequence assembly | Apache-2.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
DOI | View guide | Import to Galaxy Australia | ||
| Sequence assembly | Apache-2.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
DOI | View guide | Import to Galaxy Australia | ||
| Sequencing quality control | Apache-2.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
DOI | View guide | Import to Galaxy Australia | ||
| Sequencing quality control | Apache-2.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
DOI | View guide | Import to Galaxy Australia | ||
| Sequencing quality control | Apache-2.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
DOI | View guide | Import to Galaxy Australia | ||
| De-novo assembly | Apache-2.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
DOI | View guide | Import to Galaxy Australia | ||
| Sequence assembly validation | Apache-2.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
DOI | View guide | Import to Galaxy Australia | ||
| Apache-2.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
DOI | View guide | Import to Galaxy Australia | |||
| Taxonomic classification | GPL-3.0 | 2024-04-17 |
QCIF Bioinformatics |
Import to Galaxy Australia | ||||
| Taxonomic classification | GPL-3.0 | 2024-04-17 |
QCIF Bioinformatics |
Import to Galaxy Australia | ||||
| Apache-2.0 | 2023-01-16 |
Galaxy Australia Australian BioCommons |
DOI | View guide | Import to Galaxy Australia | |||
| Apache-2.0 | 2023-01-16 |
Janis |
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| GPL-3.0 | 2023-01-16 |
Sydney Informatics Hub Australian BioCommons |
DOI | View guide | ||||
| Indel detection SNP detection Validation | GPL-3.0 | 2023-01-16 |
Sydney Informatics Hub |
DOI | View guide | |||
| Sequencing quality control | Apache-2.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
View guide | Import to Galaxy Australia | |||
| Sequence clustering | Apache-2.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
View guide | Import to Galaxy Australia | |||
| Sequence clustering | Apache-2.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
View guide | Import to Galaxy Australia | |||
| Sequence clustering | Apache-2.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
View guide | Import to Galaxy Australia | |||
| Sequence clustering | Apache-2.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
View guide | Import to Galaxy Australia | |||
| Sequence clustering | Apache-2.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
View guide | Import to Galaxy Australia | |||
| Sequence clustering | Apache-2.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
View guide | Import to Galaxy Australia | |||
| Differential gene expression profiling Expression analysis Gene expression profiling | GPL-3.0 | 2023-01-16 |
Sydney Informatics Hub |
DOI | View guide | |||
| Genetic mapping Mapping Sequence alignment | GPL-3.0 | 2023-01-16 |
Australian BioCommons Sydney Informatics Hub |
DOI | View guide | |||
| LGPL-3.0 | 2023-01-16 |
Sydney Informatics Hub Australian BioCommons |
DOI | View guide | ||||
| Conversion Sequencing quality control | GPL-3.0 | 2023-01-30 |
Australian BioCommons Galaxy Australia |
DOI | View guide | Import to Galaxy Australia | ||
| Genome assembly Sequence alignment Sequence cutting | GPL-3.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
DOI | View guide | Import to Galaxy Australia | ||
| Genome assembly Sequence assembly validation Sequence assembly visualisation | GPL-3.0 | 2023-01-30 |
Galaxy Australia Australian BioCommons |
DOI | View guide | Import to Galaxy Australia | ||
| CC-BY-4.0 | 2023-03-21 |
Sydney Informatics Hub Australian BioCommons |
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| MIT | 2024-02-05 |
Australian BioCommons |
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| CC-BY-4.0 | 2023-11-09 |
QCIF Bioinformatics |
Import to Galaxy Australia | |||||
| CC-BY-4.0 | 2023-11-09 |
QCIF Bioinformatics |
Import to Galaxy Australia | |||||
| CC-BY-4.0 | 2023-11-09 |
QCIF Bioinformatics |
Import to Galaxy Australia | |||||
| CC-BY-4.0 | 2023-11-09 |
QCIF Bioinformatics |
Import to Galaxy Australia | |||||
| CC-BY-4.0 | 2023-11-09 |
QCIF Bioinformatics |
Import to Galaxy Australia | |||||
| CC-BY-4.0 | 2023-11-09 |
QCIF Bioinformatics |
Import to Galaxy Australia | |||||
| Taxonomic classification | CC-BY-4.0 | 2024-04-05 |
QCIF Bioinformatics |
DOI | Import to Galaxy Australia | |||
| CC-BY-4.0 | 2023-12-18 |
Sydney Informatics Hub Australian BioCommons |
DOI | |||||
| GPL-3.0 | 2023-12-20 |
Sydney Informatics Hub Australian BioCommons |
DOI | |||||
| MIT | 2024-02-08 |
Australian BioCommons |
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| CC-BY-4.0 | 2024-02-19 |
Australian BioCommons |
DOI | |||||
| GPL-3.0 | 2024-03-13 |
Australian BioCommons |
Import to Galaxy Australia | |||||
| Sequence assembly validation | GPL-3.0 | 2024-04-19 |
Galaxy Australia |
DOI | Import to Galaxy Australia | |||
| GPL-3.0 | 2024-04-25 |
Sydney Informatics Hub |
DOI | |||||
| GPL-3.0 | 2024-05-09 |
Australian BioCommons Galaxy Australia |
DOI | Import to Galaxy Australia | ||||
| GPL-3.0 | 2024-05-09 |
Australian BioCommons Galaxy Australia |
DOI | Import to Galaxy Australia | ||||
| GPL-3.0 | 2024-05-09 |
Australian BioCommons Galaxy Australia |
DOI | Import to Galaxy Australia | ||||
| GPL-3.0 | 2024-05-09 |
Australian BioCommons Galaxy Australia |
DOI | Import to Galaxy Australia | ||||
| GPL-3.0 | 2024-05-09 |
Australian BioCommons Galaxy Australia |
DOI | Import to Galaxy Australia | ||||
| Expression analysis | MIT | 2024-05-30 |
QCIF Bioinformatics |
Import to Galaxy Australia | ||||
| Expression analysis | MIT | 2024-05-30 |
QCIF Bioinformatics |
Import to Galaxy Australia | ||||
| Expression analysis | MIT | 2024-05-30 |
QCIF Bioinformatics |
Import to Galaxy Australia | ||||
| Expression analysis | MIT | 2024-05-30 |
QCIF Bioinformatics |
Import to Galaxy Australia | ||||
| MIT | 2024-05-30 |
QCIF Bioinformatics |
Import to Galaxy Australia | |||||
| Expression analysis | MIT | 2024-05-30 |
QCIF Bioinformatics |
Import to Galaxy Australia | ||||
| Expression analysis | MIT | 2024-05-30 |
QCIF Bioinformatics |
Import to Galaxy Australia | ||||
| other-closed | 2024-05-30 |
QCIF Bioinformatics |
Import to Galaxy Australia | |||||
| GPL-3.0 | 2024-06-18 |
Australian BioCommons Galaxy Australia |
DOI | Import to Galaxy Australia | ||||
| GPL-3.0 | 2024-06-20 |
Australian BioCommons Galaxy Australia |
DOI | Import to Galaxy Australia | ||||
| GPL-3.0+ | 2024-06-21 |
Australian BioCommons Galaxy Australia |
DOI | Import to Galaxy Australia | ||||