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Bioinformatics analyses by Crismani Bioinformatics.
Development of genomics resources to enhance our understanding of the evolution and conservation of the unique Australian flora.
Genome Assembly and base calling for genomes genreated by GAP.
Our research uses phylogenomics to describe and map species distribution patterns, origin and spread of a class of marine life (brittle-stars or ophiuroids) across global seafloors over the past 100 million years.
Development of a workflow for Structural variation detection and filtration.
Prenatal programming of respiratory epithelial progenitors and early postnatal respiratory disease.
Development of new molecular tools to enhance and expand the genomics-based therapeutic toolkit.
Janis is an open-source Python tool that has been developed to assist with the translation between bioinformatics workflow specifications.
Investigate plant pathogen genomics, population genetics, virulence evolution, fungicide resistance evolution, and diagnostics
Development of a scalable DIA-NN workflow for the processing of scanning SWATH mass spectra.
ONTViSc is a Nextflow-based end-to-end bioinformatics pipeline designed to help diagnostics of viruses and viroid pathogens for biosecurity.
Analysis for NVIDIA Parabricks and GATK benchmarking for RNA-Seq, based on NVIDIA recommendations as well as for designing probes for an amplicon-based SNP array genotyping platform.
Explore software and hardware efficiencies in the current deep learning revolution in computational structural biology.
Unravel the spatial signalling ecosystem of cancer cells versus normal tissues through integrated analysis of single-cell and spatial transcriptomics data.
Bioinformatics analyses for the Australian Amphibian and Reptile Genomics initiative.
Produce reference genomes for several grapevine varieties and to provide these as foundational datasets for further work.
A shared repository for bioinformatics tools, workflows, databases, and containers.
Workflow consolidation, testing and implementation for Rare Disease Genetics and Functional Genomics managed by the Harry Perkins Institute of Medical Research.
Analysis of high-risk paediatric children enrolled in the Zero Childhood Cancer initiative.
The project will analyse Tasmanian Devil genome to shed light on causes of Tasmanian Devil facial tumour disease (DFTD) disease.
This project will help life-science researchers improve the estimation of their grants and compute resources by creating a portable and rerunnable pipeline that benchmarks commonly used life-science analysis software.
Analysis of a large number of healthy and tumour samples by the Zero Childhood Cancer initiative.