The Expression Atlas is a tool to explore gene and protein expression information across a range of species (Moreno et al., 2022). Data are processed through standardised pipelines and presented as interactive visualisations. There is also a specific single-cell expression atlas. Data often comes into the expression atlas from ArrayExpress.
References
- Moreno, P., Fexova, S., George, N., Manning, J. R., Miao, Z., Mohammed, S., Muñoz-Pomer, A., Fullgrabe, A., Bi, Y., Bush, N., Iqbal, H., Kumbham, U., Solovyev, A., Zhao, L., Prakash, A., García-Seisdedos, D., Kundu, D. J., Wang, S., Walzer, M., … Papatheodorou, I. (2022). Expression Atlas update: gene and protein expression in multiple species. Nucleic Acids Research, 50(D1), D129–D140. https://doi.org/10.1093/nar/gkab1030
Relevant tools and resources
Skip tool table| Tool or resource | Description | Related pages | Registry |
|---|---|---|---|
| ArrayExpress | A repository of array based genomics data | ArrayExpress BioStudies Omics Discovery Index | Tool info Standards/Databases Training Publication |
| Expression Atlas | Expression Atlas is an open science resource that gives users a powerful way to find information about gene and protein expression across species. Data is analysed with standardised best-practice pipelines and displayed in an interactive format. | Standards/Databases Training Publication |
Editor
Australian BioCommons / University of Melbourne